Xylophilus rhododendri CJ1-R5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Xylophilus

Description

Xylophilus rhododendri CJ1-R5 is characterized by its possession of two replicons, which may suggest a complex genomic architecture. The organism is associated with two specific accessions, CP047650.1 and CP047651.1, indicating that it has been cataloged in genomic databases for further study and analysis. The replication of genomic material is significant in understanding the organism's genetic diversity and adaptability. Having two replicons might confer advantages in terms of gene regulation and metabolic versatility, potentially allowing Xylophilus rhododendri CJ1-R5 to thrive in varied environmental conditions. In terms of ecological implications, Xylophilus rhododendri CJ1-R5 may play a role in its ecosystem, possibly interacting with plant hosts such as rhododendrons, given its nomenclature. Understanding its genomic structure and accessions can provide insights into its functional capabilities, interactions with other organisms, and overall contribution to biodiversity. Further research into its biology could uncover its role in ecological systems, including plant health and disease dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylophilus rhododendri CJ1-R5, Complete Genome

Gene Summary

Adenine Count

925997 bp

Thymine Count

923894 bp

Guanine Count

2006116 bp

Cytosine Count

1998573 bp

Genome Length

5854580 bp

Protein-coding Genes

5302 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trypsin-like serine proteaseGT347_08825P45129Positive1927329 - 192830033161.9
aaa domain-containing proteinGT347_08830P94474Positive1928336 - 192934336954.0
duf58 domain-containing proteinGT347_08835P9WLX4Positive1929324 - 193027434808.7
vwa domain-containing proteinGT347_08840A1T8Q8Positive1930293 - 193143841107.2
diguanylate cyclaseGT347_08845Q55434Positive1931502 - 193243434809.9
hypothetical proteinGT347_08850Not AvailableNegative1932383 - 193306926215.8
hypothetical proteinGT347_08855Not AvailableNegative1933380 - 193426433606.0
pas domain s-box proteinGT347_08860Q48IV1Negative1934347 - 193681890349.4
hypothetical proteinGT347_08865Not AvailableNegative1936851 - 193713810685.9
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoGT347_08870Q9V0X6Positive1937245 - 193774218404.4

Displaying genes 1861 – 1870 of 5449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.