Sodalis ligni dw23

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Sodalis

Description

Sodalis ligni dw23 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests motility. The organism has a single replicon, indicating a streamlined genomic structure. The complete genomic data for this strain can be referenced through the accession number CP075169.1. This bacterium's Gram-negative classification indicates that it possesses an outer membrane, which can contribute to its resilience in various environments and influence its interactions with other microorganisms. The presence of flagella may enhance its ability to move toward nutrient sources or away from harmful conditions, potentially playing a role in its ecological niche. Understanding the traits of Sodalis ligni dw23 can provide insights into its ecological role. As a motile, Gram-negative bacterium, it may participate in complex microbial communities, possibly influencing nutrient cycling and organic matter decomposition in its habitat. The ability to navigate its environment effectively could allow this bacterium to exploit a range of ecological niches, which is vital for sustaining its population and contributing to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusSodalis
SpeciesSodalis ligni
Straindw23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sodalis ligni dw23
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sodalis ligni dw23, Complete Genome

Gene Summary

Adenine Count

1451300 bp

Thymine Count

1450926 bp

Guanine Count

1770436 bp

Cytosine Count

1771029 bp

Genome Length

6443694 bp

Protein-coding Genes

5726 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitGTU79_23365P00968Negative5005206 - 5008433117737.0
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitGTU79_23370Q8ZIL5Negative5008448 - 500962342095.3
4-hydroxy-tetrahydrodipicolinate reductaseGTU79_23375A6T4H8Negative5010059 - 501088029276.3
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseGTU79_23380A8G9L7Negative5011271 - 501222134439.2
fkbp-type peptidyl-prolyl cis-trans isomeraseGTU79_23385P0AEM2Negative5012202 - 501267517113.1
signal peptidase iiGTU79_23390Q2NVY5Negative5012681 - 501318719010.6
isoleucine--trna ligaseGTU79_23395Q2NVY6Negative5013187 - 5016003104590.0
bifunctional riboflavin kinase/fad synthetaseGTU79_23400P0AG42Negative5016036 - 501697434398.8
30s ribosomal protein s20GTU79_23405Q2NVY8Positive5017428 - 50176919781.92
na+/h+ antiporter nhaaGTU79_23410Q2NVY9Negative5017762 - 501893140301.9

Displaying genes 4681 – 4690 of 6003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.