Sodalis ligni dw23

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Sodalis

Description

Sodalis ligni dw23 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests motility. The organism has a single replicon, indicating a streamlined genomic structure. The complete genomic data for this strain can be referenced through the accession number CP075169.1. This bacterium's Gram-negative classification indicates that it possesses an outer membrane, which can contribute to its resilience in various environments and influence its interactions with other microorganisms. The presence of flagella may enhance its ability to move toward nutrient sources or away from harmful conditions, potentially playing a role in its ecological niche. Understanding the traits of Sodalis ligni dw23 can provide insights into its ecological role. As a motile, Gram-negative bacterium, it may participate in complex microbial communities, possibly influencing nutrient cycling and organic matter decomposition in its habitat. The ability to navigate its environment effectively could allow this bacterium to exploit a range of ecological niches, which is vital for sustaining its population and contributing to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusSodalis
SpeciesSodalis ligni
Straindw23

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sodalis ligni dw23
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sodalis ligni dw23, Complete Genome

Gene Summary

Adenine Count

1451300 bp

Thymine Count

1450926 bp

Guanine Count

1770436 bp

Cytosine Count

1771029 bp

Genome Length

6443694 bp

Protein-coding Genes

5726 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sll0787 family air synthase-like proteinGTU79_10070Q55946Positive2138054 - 213901334258.4
msmeg_0570 family nitrogen starvation response proteinGTU79_10075Not AvailablePositive2139035 - 213933410907.9
hypothetical proteinGTU79_10080Q5L2G3Positive2139350 - 214061944701.6
hypothetical proteinGTU79_10085P55912Positive2140606 - 214244564027.1
taurine abc transporter substrate-binding proteinGTU79_10090Q47537Positive2142676 - 214365634738.4
taurine abc transporter atp-binding subunitGTU79_10095Q1IGM2Positive2143709 - 214458431769.2
taurine abc transporter permease taucGTU79_10100Q47539Positive2144640 - 214548530613.5
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeGTU79_10105Q9A3Q9Negative2146004 - 214732947896.6
fmnh2-dependent alkanesulfonate monooxygenaseGTU79_10110Q9HYG2Negative2147403 - 214854541522.2
glycyl-radical enzyme activating proteinGTU79_10115Q727N0Negative2148700 - 214974638213.0

Displaying genes 2181 – 2190 of 6003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.