Sphingomonas profundi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Alterirhizorhabdus

Description

Sphingomonas profundi is a bacterium characterized by a single replicon, indicating its genetic structure is organized around a singular circular chromosome. This trait can influence various aspects of its biology, including replication and gene expression. The organism is cataloged under the accession number CP046535.1, which serves as a unique identifier for its genomic data in biological databases. The specific ecological role of Sphingomonas profundi is not detailed in the available information. However, members of the Sphingomonas genus are often found in diverse environments, including soil, water, and as part of microbial communities associated with plants. They are known for their ability to degrade complex organic compounds, which could suggest a potential role in bioremediation or nutrient cycling in their respective ecosystems. In summary, Sphingomonas profundi, with its single replicon structure and genomic data accession CP046535.1, likely contributes to ecological processes through its metabolic capabilities, particularly in the degradation of organic materials. This characteristic may play a significant role in maintaining the health of its environment, although specific interactions and contributions remain to be fully elucidated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusAlterirhizorhabdus
SpeciesAlterirhizorhabdus profundi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas profundi , Complete Genome

Gene Summary

Adenine Count

699442 bp

Thymine Count

698391 bp

Guanine Count

1568222 bp

Cytosine Count

1572579 bp

Genome Length

4538634 bp

Protein-coding Genes

4051 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-Q2G5N4Negative65513 - 657739063.83
hypothetical protein-Not AvailableNegative65781 - 660509368.53
hypothetical protein-A5V3X5Negative66087 - 6753851478.1
hypothetical protein-A5V3X4Negative67595 - 6847631930.8
hypothetical protein-A5V3X3Negative68529 - 7005854655.6
hypothetical protein-A5V3X2Negative70061 - 7066921318.8
hypothetical protein-P05445Negative70798 - 7296678029.9
hypothetical protein-Q9YBQ2Negative73011 - 7389530119.1
Trna-argNot AvailableNot AvailablePositive74027 - 74103Not Available
hypothetical protein-Not AvailableNegative73982 - 7426010000.9

Displaying genes 81 – 90 of 4120 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.