Vibrio algicola SM1977

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio algicola SM1977 is characterized by its unique genomic structure, comprising three replicons. This trait is significant as it may influence the bacterium's adaptability and ecological interactions. The genome of V. algicola SM1977 has been documented in three accessions: CP045699.1, CP045700.1, and CP058324.1, which provide a comprehensive genetic framework for studying its biology and potential applications. As a member of the Vibrio genus, V. algicola is likely to inhabit marine environments, where its presence can be linked to various ecological roles, including nutrient cycling and interactions with other marine organisms. The structural composition of its genome, represented by the multiple replicons, suggests a possible capacity for horizontal gene transfer, which could enhance its survival and adaptability in shifting environmental conditions. Understanding these genomic traits is crucial for assessing the ecological impact of V. algicola SM1977 in marine ecosystems. In summary, Vibrio algicola SM1977, with its three replicons and documented genomic accessions, serves as an important subject for research into microbial diversity and ecological function in marine habitats. Further exploration of its genomic characteristics may yield insights into its role in marine microbiomes and its interactions with other species in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio algicola
StrainSM1977

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio algicola SM1977
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio algicola SM1977, Complete Genome

Gene Summary

Adenine Count

724694 bp

Thymine Count

723259 bp

Guanine Count

533463 bp

Cytosine Count

537349 bp

Genome Length

2518765 bp

Protein-coding Genes

2142 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-aspNot AvailableNot AvailablePositive2197210 - 2197286Not Available
5s_rrnaNot AvailableNot AvailablePositive2197318 - 2197429Not Available
16s_rrnaNot AvailableNot AvailablePositive2200832 - 2202368Not Available
hypothetical protein-Not AvailableNegative2201076 - 220135410058.7
5s_rrnaNot AvailableNot AvailablePositive2202785 - 2202896Not Available
Trna-valNot AvailableNot AvailablePositive2206292 - 2206367Not Available
Trna-lysNot AvailableNot AvailablePositive2206411 - 2206486Not Available
Trna-gluNot AvailableNot AvailablePositive2206520 - 2206595Not Available
16s_rrnaNot AvailableNot AvailablePositive2206712 - 2208251Not Available
5s_rrnaNot AvailableNot AvailablePositive2208668 - 2208779Not Available

Displaying genes 1991 – 2000 of 3248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.