Rubrobacter tropicus

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Rubrobacteria

Order

Rubrobacterales

Family

Rubrobacteraceae

Genus

Rubrobacter

Description

Rubrobacter tropicus is a Gram-positive bacterium characterized by its rod-shaped morphology. This species is notable for possessing two replicons, indicating a unique genomic organization that may contribute to its adaptability and resilience in various environments. The genetic information for Rubrobacter tropicus can be found in the following accessions: CP045119.1 and CP045120.1. The presence of two replicons is particularly interesting as it can influence aspects such as replication, gene expression, and horizontal gene transfer. This trait may allow Rubrobacter tropicus to effectively adapt to different ecological niches and respond to environmental pressures, which is a common characteristic observed in many bacteria. In summary, Rubrobacter tropicus exemplifies a Gram-positive rod bacterium with a distinctive genomic structure, defined by its two replicons. This structural complexity may enhance its ecological versatility, potentially allowing it to thrive in various habitats and contribute to microbial diversity in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassRubrobacteria
OrderRubrobacterales
FamilyRubrobacteraceae
GenusRubrobacter
SpeciesRubrobacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrobacter tropicus , Complete Genome

Gene Summary

Adenine Count

725845 bp

Thymine Count

728551 bp

Guanine Count

1462844 bp

Cytosine Count

1461532 bp

Genome Length

4378772 bp

Protein-coding Genes

4276 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenase catalytic domain-containing proteinGBA63_16460P80094Negative3304321 - 330544538478.1
allantoin permeaseGBA63_16465P94369Negative3305442 - 330689651814.4
amidaseGBA63_16470Q39ZK0Negative3306974 - 330835349066.0
mfs transporterGBA63_16475P54559Positive3308453 - 330971243964.6
pas domain s-box proteinGBA63_16480B2SB67Negative3309914 - 331206479565.4
superoxide dismutaseGBA63_16485P28760Positive3312177 - 331280623020.5
hypothetical proteinGBA63_16490O58308Positive3312969 - 331434548450.6
l-glutamate gamma-semialdehyde dehydrogenaseGBA63_16495A4IJP9Negative3314447 - 331600656149.7
proline dehydrogenaseGBA63_16500O32179Negative3316015 - 331693234380.2
aldehyde dehydrogenase family proteinGBA63_16505D4GP41Positive3317064 - 331865956241.2

Displaying genes 3291 – 3300 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.