Rubrobacter tropicus

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Rubrobacteria

Order

Rubrobacterales

Family

Rubrobacteraceae

Genus

Rubrobacter

Description

Rubrobacter tropicus is a Gram-positive bacterium characterized by its rod-shaped morphology. This species is notable for possessing two replicons, indicating a unique genomic organization that may contribute to its adaptability and resilience in various environments. The genetic information for Rubrobacter tropicus can be found in the following accessions: CP045119.1 and CP045120.1. The presence of two replicons is particularly interesting as it can influence aspects such as replication, gene expression, and horizontal gene transfer. This trait may allow Rubrobacter tropicus to effectively adapt to different ecological niches and respond to environmental pressures, which is a common characteristic observed in many bacteria. In summary, Rubrobacter tropicus exemplifies a Gram-positive rod bacterium with a distinctive genomic structure, defined by its two replicons. This structural complexity may enhance its ecological versatility, potentially allowing it to thrive in various habitats and contribute to microbial diversity in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassRubrobacteria
OrderRubrobacterales
FamilyRubrobacteraceae
GenusRubrobacter
SpeciesRubrobacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrobacter tropicus , Complete Genome

Gene Summary

Adenine Count

725845 bp

Thymine Count

728551 bp

Guanine Count

1462844 bp

Cytosine Count

1461532 bp

Genome Length

4378772 bp

Protein-coding Genes

4276 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtGBA63_09660Q1AWE7Positive1972402 - 197300121363.6
yebc/pmpr family dna-binding transcriptional regulatorGBA63_09665Q1AWE6Positive1972988 - 197374026714.1
pas domain s-box proteinGBA63_09670Q54YZ9Positive1974083 - 1978024143406.0
hypothetical proteinGBA63_09675Not AvailablePositive1978911 - 197933314970.0
crossover junction endodeoxyribonuclease ruvcGBA63_09680Q1AWE2Positive1979447 - 197996818638.6
holliday junction branch migration protein ruvaGBA63_09685Q1AWE1Positive1979993 - 198058320826.3
holliday junction branch migration dna helicase ruvbGBA63_09690Q1AWE0Positive1980586 - 198167439666.1
hypothetical proteinGBA63_09695Not AvailablePositive1982049 - 19823249768.43
duf2183 domain-containing proteinGBA63_09700P53933Positive1982385 - 198349140468.1
dihydroxy-acid dehydrataseGBA63_09705A7NNA3Negative1983667 - 198536158714.3

Displaying genes 1931 – 1940 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.