Rubrobacter tropicus

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Rubrobacteria

Order

Rubrobacterales

Family

Rubrobacteraceae

Genus

Rubrobacter

Description

Rubrobacter tropicus is a Gram-positive bacterium characterized by its rod-shaped morphology. This species is notable for possessing two replicons, indicating a unique genomic organization that may contribute to its adaptability and resilience in various environments. The genetic information for Rubrobacter tropicus can be found in the following accessions: CP045119.1 and CP045120.1. The presence of two replicons is particularly interesting as it can influence aspects such as replication, gene expression, and horizontal gene transfer. This trait may allow Rubrobacter tropicus to effectively adapt to different ecological niches and respond to environmental pressures, which is a common characteristic observed in many bacteria. In summary, Rubrobacter tropicus exemplifies a Gram-positive rod bacterium with a distinctive genomic structure, defined by its two replicons. This structural complexity may enhance its ecological versatility, potentially allowing it to thrive in various habitats and contribute to microbial diversity in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassRubrobacteria
OrderRubrobacterales
FamilyRubrobacteraceae
GenusRubrobacter
SpeciesRubrobacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrobacter tropicus , Complete Genome

Gene Summary

Adenine Count

725845 bp

Thymine Count

728551 bp

Guanine Count

1462844 bp

Cytosine Count

1461532 bp

Genome Length

4378772 bp

Protein-coding Genes

4276 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
had-ia family hydrolaseGBA63_05255Q8R821Positive1106072 - 110672523961.4
aminotransferase class v-fold plp-dependent enzymeGBA63_05260Q9PDA6Negative1106734 - 110787640535.2
pbp1a family penicillin-binding proteinGBA63_05265O66874Positive1107927 - 111023084546.0
hypothetical proteinGBA63_05270Q8NS80Negative1110161 - 111105431867.6
sigma-70 family rna polymerase sigma factorGBA63_05275Q5HNY7Negative1111193 - 111229641190.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseGBA63_05280Q01Q43Positive1112572 - 111402950451.0
metal-sensing transcriptional repressorGBA63_05285Q7U0Y5Positive1113911 - 111429714429.2
hypothetical proteinGBA63_05290Not AvailablePositive1114300 - 11145488355.5
hypothetical proteinGBA63_05295Not AvailablePositive1114559 - 111485510765.4
orotate phosphoribosyltransferaseGBA63_05300D4GZW2Positive1114779 - 111537220611.9

Displaying genes 1051 – 1060 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.