Rubrobacter tropicus

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Rubrobacteria

Order

Rubrobacterales

Family

Rubrobacteraceae

Genus

Rubrobacter

Description

Rubrobacter tropicus is a Gram-positive bacterium characterized by its rod-shaped morphology. This species is notable for possessing two replicons, indicating a unique genomic organization that may contribute to its adaptability and resilience in various environments. The genetic information for Rubrobacter tropicus can be found in the following accessions: CP045119.1 and CP045120.1. The presence of two replicons is particularly interesting as it can influence aspects such as replication, gene expression, and horizontal gene transfer. This trait may allow Rubrobacter tropicus to effectively adapt to different ecological niches and respond to environmental pressures, which is a common characteristic observed in many bacteria. In summary, Rubrobacter tropicus exemplifies a Gram-positive rod bacterium with a distinctive genomic structure, defined by its two replicons. This structural complexity may enhance its ecological versatility, potentially allowing it to thrive in various habitats and contribute to microbial diversity in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassRubrobacteria
OrderRubrobacterales
FamilyRubrobacteraceae
GenusRubrobacter
SpeciesRubrobacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrobacter tropicus , Complete Genome

Gene Summary

Adenine Count

725845 bp

Thymine Count

728551 bp

Guanine Count

1462844 bp

Cytosine Count

1461532 bp

Genome Length

4378772 bp

Protein-coding Genes

4276 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGBA63_05105Not AvailableNegative1082055 - 10822376476.19
pas domain s-box proteinGBA63_05110P38097Negative1082294 - 10825579518.32
gyd domain-containing proteinGBA63_05115Q5SI26Positive1082763 - 108310712734.4
d-alanine--d-alanine ligaseGBA63_05120B1I3W6Negative1083344 - 108430033751.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeGBA63_05125H3ZPL1Negative1084307 - 108562648224.1
hypothetical proteinGBA63_05130Not AvailableNegative1085630 - 108622021432.4
non-canonical purine ntp pyrophosphataseGBA63_05135Q8TV07Positive1086266 - 108684420254.2
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaGBA63_05140Q4UKQ6Positive1086963 - 108800338175.9
alpha-ketoacid dehydrogenase subunit betaGBA63_05145Q1RJX3Positive1088003 - 108899536039.0
hypothetical proteinGBA63_05150Q9R9N3Positive1088997 - 109035847817.5

Displaying genes 1021 – 1030 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.