Nitrincola iocasae KXZD1103

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Nitrincola

Description

Nitrincola iocasae KXZD1103 is a Gram-negative, rod-shaped bacterium characterized by its unique genetic structure, which consists of two replicons. The organism is cataloged under accession numbers CP044222.1 and CP044223.1, indicating its genetic sequences are available for further study and analysis. As a member of the Nitrincola genus, N. iocasae is likely involved in nitrogen cycling within its environment, which is a critical process in various ecosystems. The characteristics of being Gram-negative and rod-shaped suggest that it may possess specific adaptations that facilitate its survival and functionality in its ecological niche, potentially including the ability to thrive in diverse environmental conditions. Understanding the genetic makeup and physiological traits of Nitrincola iocasae can provide insights into its role in biogeochemical cycles, particularly in nitrogen transformation processes. Its dual-replicon system may offer advantages in gene regulation and adaptation to environmental changes, which could enhance its efficacy in nitrification or denitrification activities. This bacterium's ecological importance may extend to its potential applications in bioremediation or agricultural practices, where managing nitrogen levels is crucial for soil health and productivity. The study of Nitrincola iocasae could contribute valuable knowledge to the field of microbiology and environmental science, particularly in understanding the dynamics of microbial communities in relation to nitrogen cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNitrincola
SpeciesNitrincola iocasae
StrainKXZD1103

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrincola iocasae KXZD1103, Complete Genome

Gene Summary

Adenine Count

1033227 bp

Thymine Count

1030232 bp

Guanine Count

1034287 bp

Cytosine Count

1031486 bp

Genome Length

4129232 bp

Protein-coding Genes

3675 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit aF5I99_18435Q2S6N5Negative3992585 - 399340330479.9
hypothetical proteinF5I99_18440Q9HT13Negative3993420 - 399386916844.2
parb/repb/spo0j family partition proteinF5I99_18445P0A151Negative3993989 - 399488832983.8
para family proteinF5I99_18450P0A149Negative3994888 - 399570329634.1
16s rrna (guanine(527)-n(7))-methyltransferase rsmgF5I99_18455Q48BF5Negative3995706 - 399632922617.4
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgF5I99_18460Q2S6M9Negative3996326 - 399822470007.8
copper chaperone pcu(a)cF5I99_18465Not AvailablePositive3998795 - 399934619983.1
carboxymuconolactone decarboxylase family proteinF5I99_18470Not AvailableNegative3999425 - 399998220694.6
aspartate aminotransferase family proteinF5I99_18475O94562Negative3999992 - 400132047832.5
cryptochrome/photolyase family proteinF5I99_18480A9CH39Negative4001444 - 400296759354.8

Displaying genes 3691 – 3700 of 3881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.