Nitrincola iocasae KXZD1103

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Nitrincola

Description

Nitrincola iocasae KXZD1103 is a Gram-negative, rod-shaped bacterium characterized by its unique genetic structure, which consists of two replicons. The organism is cataloged under accession numbers CP044222.1 and CP044223.1, indicating its genetic sequences are available for further study and analysis. As a member of the Nitrincola genus, N. iocasae is likely involved in nitrogen cycling within its environment, which is a critical process in various ecosystems. The characteristics of being Gram-negative and rod-shaped suggest that it may possess specific adaptations that facilitate its survival and functionality in its ecological niche, potentially including the ability to thrive in diverse environmental conditions. Understanding the genetic makeup and physiological traits of Nitrincola iocasae can provide insights into its role in biogeochemical cycles, particularly in nitrogen transformation processes. Its dual-replicon system may offer advantages in gene regulation and adaptation to environmental changes, which could enhance its efficacy in nitrification or denitrification activities. This bacterium's ecological importance may extend to its potential applications in bioremediation or agricultural practices, where managing nitrogen levels is crucial for soil health and productivity. The study of Nitrincola iocasae could contribute valuable knowledge to the field of microbiology and environmental science, particularly in understanding the dynamics of microbial communities in relation to nitrogen cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNitrincola
SpeciesNitrincola iocasae
StrainKXZD1103

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrincola iocasae KXZD1103, Complete Genome

Gene Summary

Adenine Count

1033227 bp

Thymine Count

1030232 bp

Guanine Count

1034287 bp

Cytosine Count

1031486 bp

Genome Length

4129232 bp

Protein-coding Genes

3675 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorF5I99_15685Not AvailablePositive3405630 - 340598312736.5
cbs domain-containing proteinF5I99_15690P50100Positive3405999 - 340638514119.5
lipoyl synthaseF5I99_15695A6V0B4Negative3406450 - 340742436499.2
lipoyl(octanoyl) transferase lipbF5I99_15700Q87RR0Negative3407433 - 340807723799.9
duf493 family proteinF5I99_15705C1DMQ9Negative3408081 - 340835610118.0
d-alanyl-d-alanine carboxypeptidaseF5I99_15710P08506Negative3408376 - 340953342690.9
septal ring lytic transglycosylase rlpa family proteinF5I99_15715Q9KTF4Negative3409619 - 341049731368.5
rod shape-determining protein rodaF5I99_15720P0ABG8Negative3410565 - 341170741473.1
penicillin-binding protein 2F5I99_15725P0AD67Negative3411700 - 341358970743.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhF5I99_15730Q1QXB1Negative3413599 - 341406617302.9

Displaying genes 3141 – 3150 of 3881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.