Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Nitrincola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Nitrincola |
| Species | Nitrincola iocasae |
| Strain | KXZD1103 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1033227 bp
Thymine Count
1030232 bp
Guanine Count
1034287 bp
Cytosine Count
1031486 bp
Genome Length
4129232 bp
Protein-coding Genes
3675 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | F5I99_00090 | Q88RQ6 | Positive | 21084 - 22004 | 35070.1 |
| shikimate dehydrogenase | F5I99_00095 | B3PGZ3 | Positive | 21997 - 22839 | 30089.9 |
| aaa family atpase | F5I99_00100 | P75867 | Positive | 22936 - 25308 | 88725.5 |
| cida/lrga family protein | F5I99_00105 | Not Available | Positive | 25327 - 25695 | 13143.1 |
| lrgb family protein | F5I99_00110 | P0AD19 | Positive | 25688 - 26419 | 25883.8 |
| gamma carbonic anhydrase family protein | F5I99_00115 | P0A9W9 | Negative | 26424 - 26966 | 19764.8 |
| oligopeptidase a | F5I99_00120 | P27298 | Positive | 27087 - 29129 | 76850.2 |
| yhev family putative metal-binding protein | F5I99_00125 | P0ADX0 | Positive | 29137 - 29418 | 10585.7 |
| mate family efflux transporter | F5I99_00130 | P28303 | Negative | 29425 - 30762 | 49419.4 |
| zinc abc transporter permease subunit znub | F5I99_00135 | P39832 | Negative | 30762 - 31556 | 28232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
