Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 1328221 - 1328287 | Not Available |
| Attl | Not Available | Not Available | Positive | 1431100 - 1431111 | Not Available |
| Capsid serine protease | F3W81_06820 | P03711 | Negative | 1433460 - 1434371 | 31533.9 |
| Putative portal protein | F3W81_06825 | Q9ZXB2 | Negative | 1434368 - 1435669 | 47162.8 |
| Terminase large subunit | F3W81_06830 | P59217 | Negative | 1435666 - 1437333 | 62150.2 |
| Small terminase | F3W81_06835 | Not Available | Negative | 1437320 - 1437766 | 16052.2 |
| Hypothetical protein | F3W81_06840 | Not Available | Negative | 1437876 - 1438253 | 14092.8 |
| hypothetical protein | F3W81_06845 | Not Available | Negative | 1438356 - 1439021 | 24966.9 |
| hypothetical protein | F3W81_06850 | Not Available | Negative | 1439018 - 1439605 | 21159.3 |
| Putative dna replication protein o | F3W81_06855 | Not Available | Negative | 1439874 - 1440560 | 25995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
