Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polymer-forming cytoskeletal protein | F3W81_02660 | Not Available | Negative | 559823 - 560335 | 17720.9 |
| peptidoglycan dd-metalloendopeptidase family protein | F3W81_02665 | P0AFT0 | Negative | 560325 - 561650 | 48833.1 |
| duf455 family protein | F3W81_02670 | P43935 | Negative | 561873 - 562697 | 30260.2 |
| redoxin domain-containing protein | F3W81_02675 | Q8P9V9 | Negative | 562995 - 563456 | 16684.8 |
| hypothetical protein | F3W81_02680 | Not Available | Positive | 563631 - 567266 | 127412.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | F3W81_02685 | Q5LRA3 | Positive | 567330 - 568385 | 37943.3 |
| mfs transporter | F3W81_02690 | A1JMG4 | Positive | 568515 - 569780 | 44509.1 |
| duf924 family protein | F3W81_02695 | Not Available | Positive | 569885 - 570463 | 21721.9 |
| dihydrolipoyl dehydrogenase | F3W81_02700 | P50970 | Positive | 570724 - 572118 | 49517.3 |
| excinuclease abc subunit uvra | F3W81_02705 | Q89L46 | Positive | 572296 - 575163 | 105880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
