Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | F3W81_02075 | O33517 | Positive | 439201 - 440844 | 58334.8 |
| protein translocase subunit secf | F3W81_02080 | O33568 | Positive | 440846 - 441817 | 35320.0 |
| hypothetical protein | F3W81_02085 | P29962 | Positive | 441912 - 442265 | 12492.0 |
| heme abc exporter atp-binding protein ccma | F3W81_02090 | Q166I9 | Positive | 442508 - 443125 | 21805.6 |
| heme exporter protein ccmb | F3W81_02095 | P29960 | Positive | 443122 - 443778 | 22512.9 |
| transcriptional regulator | F3W81_02100 | P52220 | Positive | 443819 - 444550 | 27165.7 |
| heme exporter protein ccmd | F3W81_02105 | P29963 | Positive | 444561 - 444716 | 5681.22 |
| dsbe family thiol:disulfide interchange protein | F3W81_02110 | P36893 | Positive | 444709 - 445254 | 19567.7 |
| duf4396 domain-containing protein | F3W81_02115 | Not Available | Negative | 445276 - 445923 | 23558.2 |
| aconitate hydratase acna | F3W81_02120 | Q9I3F5 | Negative | 446248 - 448995 | 99371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
