Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tror domain transcriptional regulator | F3W81_06170 | Not Available | Negative | 1307429 - 1308004 | 21370.2 |
| Transposition protein b | F3W81_06175 | Not Available | Negative | 1308001 - 1308774 | 29221.3 |
| Transposase a | F3W81_06180 | Not Available | Negative | 1308809 - 1311085 | 86159.4 |
| Conserved transposable prophage protein | F3W81_06185 | Not Available | Negative | 1311082 - 1311549 | 17466.0 |
| Chromosome partitioning protein parb | F3W81_06190 | Q83AH2 | Negative | 1311546 - 1312367 | 30217.0 |
| Hypothetical protein | F3W81_06195 | Not Available | Negative | 1312539 - 1312904 | 12898.3 |
| Hypothetical protein | F3W81_06200 | P06903 | Negative | 1312901 - 1313215 | 11420.6 |
| C-repressor | F3W81_06205 | P44207 | Positive | 1313502 - 1314107 | 21890.8 |
| Hypothetical protein | F3W81_06210 | Not Available | Positive | 1314113 - 1314472 | 12736.4 |
| hypothetical protein | F3W81_06215 | Not Available | Negative | 1315077 - 1315667 | 22270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
