Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | F3W81_01925 | O31680 | Negative | 403024 - 403773 | 26352.3 |
| alpha/beta fold hydrolase | F3W81_01930 | P25026 | Negative | 403889 - 404878 | 35479.0 |
| nadp oxidoreductase | F3W81_01935 | Q658P3 | Negative | 405054 - 405674 | 21443.7 |
| alpha/beta fold hydrolase | F3W81_01940 | Not Available | Negative | 405845 - 406609 | 25935.5 |
| lysr family transcriptional regulator | F3W81_01945 | Q9EXL7 | Positive | 406744 - 407727 | 36134.3 |
| tyrosine-type recombinase/integrase | F3W81_01950 | P10487 | Negative | 408309 - 409403 | 41012.3 |
| trna dihydrouridine(20/20a) synthase dusa | F3W81_01955 | Q87L85 | Positive | 409441 - 410547 | 39590.7 |
| bcr/cfla family efflux mfs transporter | F3W81_01960 | P96709 | Negative | 410612 - 411790 | 40953.0 |
| tsup family transporter | F3W81_01965 | P44070 | Positive | 412006 - 412830 | 28651.4 |
| duf1289 domain-containing protein | F3W81_01970 | Not Available | Negative | 412866 - 413117 | 9381.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
