Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | F3W81_01875 | P9WMD4 | Positive | 391398 - 391922 | 18921.8 |
| mfs transporter | F3W81_01880 | Not Available | Positive | 391919 - 393052 | 36779.6 |
| hypothetical protein | F3W81_01885 | Not Available | Positive | 393368 - 393967 | 22789.5 |
| hypothetical protein | F3W81_01890 | Not Available | Negative | 394224 - 395261 | 39180.0 |
| hypothetical protein | F3W81_01895 | Not Available | Negative | 395653 - 397066 | 51664.0 |
| gmc family oxidoreductase | F3W81_01900 | Q88AE7 | Negative | 397927 - 399618 | 59811.4 |
| hypothetical protein | F3W81_01905 | P10183 | Negative | 399959 - 400741 | 29355.4 |
| isochorismatase family protein | F3W81_01910 | P21367 | Positive | 400918 - 401652 | 26132.7 |
| transposase | F3W81_01915 | Not Available | Negative | 401790 - 401897 | 4175.9 |
| dde-type integrase/transposase/recombinase | F3W81_01920 | P16942 | Negative | 402044 - 402286 | 9132.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
