Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_01675 | P49323 | Negative | 354803 - 355640 | 31583.1 |
| ghkl domain-containing protein | F3W81_01680 | Q8KIY1 | Positive | 356239 - 359913 | 133413.0 |
| response regulator | F3W81_01685 | Q8KR08 | Negative | 359966 - 360331 | 12795.6 |
| response regulator | F3W81_01690 | P15940 | Negative | 360408 - 361064 | 23898.8 |
| diguanylate cyclase | F3W81_01695 | Q55434 | Negative | 361448 - 362752 | 47189.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | F3W81_01700 | Q02636 | Negative | 362922 - 364106 | 42958.6 |
| alcohol dehydrogenase catalytic domain-containing protein | F3W81_01705 | A4YGN0 | Negative | 364145 - 365185 | 36399.8 |
| hypothetical protein | F3W81_01710 | P27872 | Negative | 365381 - 365848 | 16901.4 |
| hypothetical protein | F3W81_01715 | Not Available | Negative | 365778 - 366107 | 11551.9 |
| transporter substrate-binding domain-containing protein | F3W81_01720 | P02910 | Positive | 366183 - 366974 | 28199.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
