Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | F3W81_20545 | Q53191 | Positive | 4351434 - 4352384 | 33459.1 |
| abc transporter permease subunit | F3W81_20550 | A0A0H2ZFV0 | Positive | 4352381 - 4353271 | 31380.5 |
| dipeptide abc transporter atp-binding protein | F3W81_20555 | P9WQJ4 | Positive | 4353271 - 4355115 | 66973.6 |
| beta-glucosidase | F3W81_20560 | Q7WUL3 | Positive | 4355112 - 4356812 | 61192.2 |
| tetr family transcriptional regulator | F3W81_20565 | P9WMC6 | Positive | 4356952 - 4357584 | 23524.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | F3W81_20570 | E1VBK1 | Positive | 4357849 - 4358829 | 35113.6 |
| trap transporter small permease subunit | F3W81_20575 | Not Available | Positive | 4358898 - 4359422 | 18780.2 |
| trap transporter large permease subunit | F3W81_20580 | Q9HU16 | Positive | 4359445 - 4360755 | 46352.2 |
| hypothetical protein | F3W81_20585 | Not Available | Positive | 4360760 - 4361233 | 17095.6 |
| amidohydrolase family protein | F3W81_20590 | P40896 | Positive | 4361254 - 4362489 | 43421.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
