Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | F3W81_20295 | Q59659 | Positive | 4291369 - 4291758 | 14371.6 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | F3W81_20300 | Q59660 | Positive | 4291773 - 4292144 | 13448.8 |
| succinate dehydrogenase flavoprotein subunit | F3W81_20305 | Q59661 | Positive | 4292160 - 4293965 | 65294.2 |
| succinate dehydrogenase iron-sulfur subunit | F3W81_20310 | Q59662 | Positive | 4293976 - 4294758 | 29702.0 |
| hypothetical protein | F3W81_20315 | Not Available | Positive | 4295665 - 4295868 | 7594.36 |
| type iii plp-dependent enzyme | F3W81_20320 | Q9UQW9 | Positive | 4296083 - 4297306 | 44581.4 |
| duf1989 domain-containing protein | F3W81_20325 | Q10082 | Positive | 4297415 - 4298278 | 30939.3 |
| aldo/keto reductase | F3W81_20330 | C6TBN2 | Negative | 4298330 - 4299319 | 35429.3 |
| hypothetical protein | F3W81_20335 | Not Available | Negative | 4299458 - 4300480 | 36770.8 |
| acylphosphatase | F3W81_20340 | Q2RQZ4 | Negative | 4300586 - 4300861 | 9670.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
