Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | F3W81_20145 | P74101 | Negative | 4262180 - 4263031 | 31379.2 |
| dna-3-methyladenine glycosylase i | F3W81_20150 | P05100 | Positive | 4263101 - 4263697 | 22206.5 |
| redoxin domain-containing protein | F3W81_20155 | P43221 | Negative | 4263813 - 4264379 | 20104.1 |
| argininosuccinate lyase | F3W81_20160 | Q5LXC0 | Positive | 4264402 - 4265793 | 49908.8 |
| hypothetical protein | F3W81_20165 | Not Available | Positive | 4265772 - 4265960 | 6004.32 |
| duf2834 domain-containing protein | F3W81_20170 | Not Available | Positive | 4265960 - 4266274 | 11507.3 |
| diaminopimelate decarboxylase | F3W81_20175 | P19572 | Positive | 4266329 - 4267594 | 45538.9 |
| tigr02302 family protein | F3W81_20180 | Not Available | Positive | 4267628 - 4270189 | 93687.4 |
| hypothetical protein | F3W81_20185 | Q9ZDX1 | Negative | 4270275 - 4270973 | 25412.7 |
| atp-binding cassette domain-containing protein | F3W81_20190 | P44871 | Positive | 4271211 - 4271888 | 24602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
