Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_19995 | Not Available | Negative | 4232879 - 4233436 | 19300.6 |
| aspartate carbamoyltransferase catalytic subunit | F3W81_20000 | Q5LX75 | Negative | 4233529 - 4234485 | 35137.6 |
| uracil-dna glycosylase | F3W81_20005 | Q5SKC5 | Positive | 4234629 - 4235423 | 29002.0 |
| lyse family translocator | F3W81_20010 | Q9KVK7 | Positive | 4235423 - 4236037 | 21018.2 |
| molybdenum cofactor biosynthesis protein b | F3W81_20015 | P0AF00 | Positive | 4236042 - 4236578 | 19434.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | F3W81_20020 | F2EYD8 | Positive | 4236701 - 4238173 | 51786.2 |
| acrb/acrd/acrf family protein | F3W81_20025 | P24177 | Positive | 4238177 - 4241578 | 122541.0 |
| hypothetical protein | F3W81_20030 | Not Available | Negative | 4241593 - 4242402 | 28774.4 |
| hypothetical protein | F3W81_20035 | Q28KE9 | Positive | 4242510 - 4243142 | 22142.5 |
| threonylcarbamoyl-amp synthase | F3W81_20040 | P39153 | Negative | 4243167 - 4244126 | 33096.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
