Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter, permease protein phne | F3W81_01525 | A0A140NFA3 | Positive | 325814 - 326698 | 31740.3 |
| phosphonate abc transporter, permease protein phne | F3W81_01530 | A0A140NFA3 | Positive | 326695 - 328017 | 48103.1 |
| chloramphenicol acetyltransferase | F3W81_01535 | P26838 | Positive | 328093 - 328710 | 22722.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | F3W81_01540 | P16689 | Negative | 328793 - 329977 | 43056.3 |
| phosphonate metabolism transcriptional regulator phnf | F3W81_01545 | O86029 | Negative | 330079 - 330822 | 26559.7 |
| phosphonate c-p lyase system protein phng | F3W81_01550 | Q52984 | Positive | 330935 - 331384 | 15790.1 |
| phosphonate c-p lyase system protein phnh | F3W81_01555 | Q52985 | Positive | 331390 - 331965 | 20030.8 |
| carbon-phosphorus lyase complex subunit phni | F3W81_01560 | Q52986 | Positive | 331965 - 333062 | 40740.5 |
| carbon-phosphorus lyase | F3W81_01565 | Q52987 | Positive | 333154 - 334014 | 31852.8 |
| phosphonate c-p lyase system protein phnk | F3W81_01570 | P16678 | Positive | 334041 - 334811 | 27977.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
