Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | F3W81_19795 | Q91YY4 | Positive | 4194491 - 4195207 | 26367.9 |
| transporter substrate-binding domain-containing protein | F3W81_19800 | Q52663 | Positive | 4195438 - 4196457 | 35676.1 |
| abc transporter permease subunit | F3W81_19805 | Q52664 | Positive | 4196586 - 4197842 | 45827.1 |
| abc transporter permease subunit | F3W81_19810 | Q52665 | Positive | 4197844 - 4199160 | 48377.3 |
| atp-binding cassette domain-containing protein | F3W81_19815 | Q52666 | Positive | 4199173 - 4199970 | 29916.3 |
| histidine phosphatase family protein | F3W81_19820 | P9WGF8 | Negative | 4200058 - 4200552 | 17791.1 |
| acetylglutamate kinase | F3W81_19825 | Q5LW17 | Negative | 4200619 - 4201485 | 30492.1 |
| outer membrane beta-barrel protein | F3W81_19830 | Q52866 | Positive | 4201715 - 4202419 | 24272.0 |
| hypothetical protein | F3W81_19835 | Not Available | Positive | 4202565 - 4203077 | 17804.2 |
| yiha family ribosome biogenesis gtp-binding protein | F3W81_19840 | Q1GJX8 | Negative | 4203151 - 4203801 | 23695.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
