Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | F3W81_01475 | Q1GEZ5 | Negative | 316873 - 317595 | 24883.9 |
| duf2147 domain-containing protein | F3W81_01480 | Not Available | Positive | 317783 - 318172 | 13691.6 |
| imidazole glycerol phosphate synthase subunit hish | F3W81_01485 | O33565 | Negative | 318211 - 318870 | 23375.1 |
| imidazoleglycerol-phosphate dehydratase hisb | F3W81_01490 | Q5LU92 | Negative | 318871 - 319458 | 21504.4 |
| hypothetical protein | F3W81_01495 | E5KK10 | Negative | 319576 - 320322 | 26939.5 |
| response regulator | F3W81_01500 | Q00934 | Positive | 320462 - 321232 | 28712.8 |
| response regulator | F3W81_01505 | P46384 | Negative | 321542 - 321961 | 15943.0 |
| pas domain-containing protein | F3W81_01510 | O69729 | Negative | 321958 - 323499 | 55194.0 |
| phosphonate abc transporter atp-binding protein | F3W81_01515 | Q5LVC2 | Positive | 323951 - 324766 | 29940.2 |
| phosphonate abc transporter substrate-binding protein | F3W81_01520 | A0QQ71 | Positive | 324824 - 325732 | 31952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
