Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | F3W81_18995 | H9N291 | Positive | 4032877 - 4034553 | 59144.2 |
| glutathione s-transferase | F3W81_19000 | Q52828 | Positive | 4034563 - 4035198 | 22850.4 |
| hypothetical protein | F3W81_19005 | Not Available | Negative | 4035187 - 4035441 | 9836.73 |
| lysr family transcriptional regulator | F3W81_19010 | P16931 | Positive | 4035570 - 4036433 | 30899.1 |
| substrate-binding domain-containing protein | F3W81_19015 | P37947 | Negative | 4036441 - 4037478 | 37472.7 |
| dctp family trap transporter solute-binding subunit | F3W81_19020 | A1WPV4 | Positive | 4037654 - 4038667 | 35828.0 |
| trap transporter small permease subunit | F3W81_19025 | Q312S1 | Positive | 4038667 - 4039185 | 18318.2 |
| trap transporter large permease subunit | F3W81_19030 | Q9KR66 | Positive | 4039182 - 4040459 | 44521.4 |
| voc family protein | F3W81_19035 | Not Available | Positive | 4040470 - 4041009 | 20259.2 |
| ribulose 1,5-bisphosphate carboxylase | F3W81_19040 | Q7WNK2 | Positive | 4041014 - 4042279 | 44699.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
