Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | F3W81_01370 | Q39BA7 | Positive | 293699 - 294526 | 29106.0 |
| alpha/beta fold hydrolase | F3W81_01375 | P59588 | Negative | 294590 - 295543 | 34510.5 |
| sterol carrier family protein | F3W81_01380 | P22307 | Negative | 295594 - 295890 | 9820.43 |
| tetratricopeptide repeat protein | F3W81_01385 | Q2K4E6 | Positive | 295964 - 296527 | 20295.3 |
| disulfide oxidoreductase | F3W81_01390 | O94445 | Positive | 296594 - 299461 | 105462.0 |
| rna-binding s4 domain-containing protein | F3W81_01395 | P0ACH0 | Positive | 299489 - 299851 | 13446.2 |
| duf3470 domain-containing protein | F3W81_01400 | P0CY91 | Positive | 299902 - 300240 | 12667.8 |
| card family transcriptional regulator | F3W81_01405 | A0R561 | Positive | 300460 - 300969 | 18832.6 |
| adenosylcobinamide-gdp ribazoletransferase | F3W81_01410 | Q89Q75 | Negative | 301026 - 301763 | 24847.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | F3W81_01415 | Q5LTJ1 | Positive | 301831 - 302841 | 33906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
