Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | F3W81_01270 | Q8EGF8 | Positive | 274290 - 275777 | 56518.0 |
| lysr family transcriptional regulator | F3W81_01275 | P0ACR7 | Negative | 275784 - 276716 | 34341.7 |
| phnd/ssua/transferrin family substrate-binding protein | F3W81_01280 | C0SP84 | Positive | 276837 - 277844 | 34924.7 |
| isochorismatase family protein | F3W81_01285 | Q4ZXR8 | Positive | 277877 - 278563 | 24423.1 |
| pyrimidine utilization protein c | F3W81_01290 | Q6FFZ5 | Positive | 278560 - 278952 | 13830.5 |
| abc transporter permease subunit | F3W81_01295 | O34649 | Positive | 278949 - 279758 | 28847.3 |
| pyrimidine utilization protein d | F3W81_01300 | A8IAD8 | Positive | 279796 - 280605 | 28613.2 |
| atp-binding cassette domain-containing protein | F3W81_01305 | O34314 | Positive | 280602 - 281375 | 28280.3 |
| cupin domain-containing protein | F3W81_01310 | Not Available | Positive | 281560 - 281961 | 14449.6 |
| molybdopterin-dependent oxidoreductase | F3W81_01315 | P77489 | Negative | 282108 - 284360 | 78578.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
