Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | F3W81_01220 | Q8X8Q3 | Negative | 257432 - 258580 | 41972.8 |
| diguanylate cyclase | F3W81_01225 | P54595 | Negative | 258827 - 259903 | 38551.8 |
| eal domain-containing protein | F3W81_01230 | Q9HYT3 | Negative | 260141 - 263185 | 111962.0 |
| hypothetical protein | F3W81_01235 | Not Available | Positive | 264245 - 264925 | 24908.3 |
| udp-forming cellulose synthase catalytic subunit | F3W81_01240 | P58931 | Positive | 264963 - 267302 | 87436.1 |
| hypothetical protein | F3W81_01245 | Not Available | Positive | 267299 - 269518 | 80199.0 |
| glycosyl hydrolase family 5 | F3W81_01250 | P37696 | Positive | 269515 - 270633 | 40048.6 |
| hypothetical protein | F3W81_01255 | Not Available | Positive | 270636 - 272105 | 53083.5 |
| viral aspartic protease | F3W81_01260 | Not Available | Positive | 272132 - 273022 | 31924.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | F3W81_01265 | Not Available | Positive | 273012 - 274118 | 39968.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
