Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | F3W81_01170 | Q1M7R4 | Positive | 246634 - 247434 | 28835.8 |
| abc transporter permease subunit | F3W81_01175 | Q57306 | Positive | 247518 - 248201 | 24536.1 |
| uridine phosphorylase | F3W81_01180 | Q5JJC1 | Positive | 248191 - 248955 | 26642.9 |
| phnd/ssua/transferrin family substrate-binding protein | F3W81_01185 | A9WGD2 | Positive | 248975 - 249964 | 34745.2 |
| abc transporter permease subunit | F3W81_01190 | Q57306 | Positive | 249968 - 250711 | 26565.8 |
| phosphopentomutase | F3W81_01195 | C3MBH5 | Positive | 250704 - 251948 | 43195.3 |
| abc transporter permease subunit | F3W81_01200 | P40401 | Positive | 252055 - 252918 | 31224.9 |
| abc transporter substrate-binding protein | F3W81_01205 | Not Available | Positive | 252943 - 253968 | 37119.6 |
| atp-binding cassette domain-containing protein | F3W81_01210 | Q0BUR6 | Positive | 253965 - 254711 | 26015.6 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | F3W81_01215 | P05465 | Negative | 254786 - 257218 | 87577.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
