Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | F3W81_13795 | Q5LNI8 | Negative | 2924442 - 2925350 | 31789.7 |
| peptide deformylase | F3W81_13800 | B6JJP8 | Negative | 2925410 - 2925904 | 18529.6 |
| peptide deformylase | F3W81_13805 | B6JJP8 | Negative | 2925901 - 2926398 | 18265.9 |
| peptide deformylase | F3W81_13810 | Q92SH6 | Negative | 2926421 - 2926948 | 19911.2 |
| putative c-s lyase | F3W81_13815 | Q08432 | Positive | 2927062 - 2928234 | 42813.0 |
| voc family protein | F3W81_13820 | Not Available | Positive | 2928398 - 2929027 | 22655.8 |
| hsp20 family protein | F3W81_13825 | B5XT60 | Negative | 2929085 - 2929561 | 17394.5 |
| trypsin-like serine protease | F3W81_13830 | P76176 | Negative | 2929700 - 2930497 | 27781.6 |
| glycolate oxidase subunit glcf | F3W81_13835 | P52074 | Negative | 2930561 - 2931889 | 48255.9 |
| glycolate oxidase subunit glce | F3W81_13840 | P52073 | Negative | 2931926 - 2933098 | 40560.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
