Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | F3W81_13645 | Q1RGZ5 | Negative | 2894963 - 2895640 | 24609.0 |
| duf721 domain-containing protein | F3W81_13650 | Not Available | Negative | 2895658 - 2896167 | 18215.1 |
| a/g-specific adenine glycosylase | F3W81_13655 | Q05869 | Positive | 2896349 - 2897353 | 36399.8 |
| alkane 1-monooxygenase | F3W81_13660 | Q6H941 | Positive | 2897371 - 2898492 | 43262.8 |
| acyl-coa dehydrogenase | F3W81_13665 | I6YCF5 | Negative | 2898722 - 2899783 | 37531.9 |
| pimeloyl-coa dehydrogenase large subunit | F3W81_13670 | P95280 | Negative | 2899787 - 2900971 | 43772.3 |
| 3-hydroxyacyl-coa dehydrogenase | F3W81_13675 | Q6NYL3 | Negative | 2900976 - 2903087 | 74578.8 |
| adenine deaminase | F3W81_13680 | A4WP35 | Negative | 2903225 - 2904925 | 60710.7 |
| faa hydrolase family protein | F3W81_13685 | O86042 | Positive | 2905031 - 2905720 | 24173.8 |
| tetr family transcriptional regulator | F3W81_13690 | Not Available | Positive | 2905862 - 2906395 | 19348.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
