Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | F3W81_13595 | Q5LMK7 | Positive | 2884791 - 2885666 | 30802.5 |
| hypothetical protein | F3W81_13600 | Not Available | Positive | 2885780 - 2886250 | 15566.1 |
| tetratricopeptide repeat protein | F3W81_13605 | Not Available | Positive | 2887058 - 2888461 | 50542.1 |
| manganese-binding transcriptional regulator mntr | F3W81_13610 | Q8X7U4 | Negative | 2888466 - 2888894 | 15583.8 |
| mn(2+) uptake nramp transporter mnth | F3W81_13615 | Q0BW85 | Positive | 2889055 - 2890344 | 45220.2 |
| voc family protein | F3W81_13620 | O34689 | Negative | 2890466 - 2891053 | 21992.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | F3W81_13625 | P95468 | Negative | 2891156 - 2892340 | 42637.3 |
| 3-mercaptopyruvate sulfurtransferase | F3W81_13630 | O64530 | Negative | 2892348 - 2893199 | 31202.2 |
| ssra-binding protein smpb | F3W81_13635 | Q1GDQ2 | Negative | 2893271 - 2893744 | 18209.1 |
| zinc-binding dehydrogenase | F3W81_13640 | P76113 | Positive | 2893874 - 2894899 | 36499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
