Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | F3W81_13495 | Q00594 | Positive | 2863902 - 2865542 | 59688.8 |
| hypothetical protein | F3W81_13500 | Not Available | Negative | 2865630 - 2866442 | 28948.2 |
| atp-binding cassette domain-containing protein | F3W81_13505 | P21630 | Negative | 2866689 - 2867384 | 25307.3 |
| atp-binding cassette domain-containing protein | F3W81_13510 | P21629 | Negative | 2867408 - 2868175 | 27722.5 |
| branched-chain amino acid abc transporter permease | F3W81_13515 | P22729 | Negative | 2868172 - 2869440 | 45251.8 |
| branched-chain amino acid abc transporter permease | F3W81_13520 | P21627 | Negative | 2869437 - 2870369 | 33385.5 |
| abc transporter substrate-binding protein | F3W81_13525 | Q2YL86 | Negative | 2870469 - 2871704 | 44229.1 |
| acyl-coa dehydrogenase | F3W81_13530 | I6Y3V5 | Positive | 2871847 - 2873040 | 43448.7 |
| acyl-coa dehydrogenase | F3W81_13535 | I6YCF5 | Positive | 2873086 - 2874174 | 37512.4 |
| sdr family oxidoreductase | F3W81_13540 | Q9RPT1 | Positive | 2874182 - 2875003 | 28177.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
