Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | F3W81_00870 | O31916 | Positive | 189674 - 190339 | 24167.2 |
| duf883 family protein | F3W81_00875 | Not Available | Positive | 190405 - 190794 | 13493.7 |
| hypothetical protein | F3W81_00880 | Not Available | Negative | 191101 - 191190 | 2353.66 |
| Trna-gly | Not Available | Not Available | Positive | 191387 - 191460 | Not Available |
| trap transporter large permease subunit | F3W81_00890 | Q9HU16 | Negative | 191517 - 192815 | 46106.3 |
| trap transporter small permease subunit | F3W81_00895 | Q4TVS0 | Negative | 192867 - 193370 | 18436.1 |
| abc transporter substrate-binding protein | F3W81_00900 | Q8KR68 | Negative | 193415 - 194413 | 34940.8 |
| marr family transcriptional regulator | F3W81_00905 | B0FXI7 | Positive | 194587 - 195060 | 18112.8 |
| flavin reductase | F3W81_00910 | A4VQH9 | Negative | 195079 - 195594 | 18232.6 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | F3W81_00915 | O05617 | Negative | 195604 - 196560 | 34114.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
