Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | F3W81_13395 | Q9ZUC2 | Positive | 2839530 - 2840180 | 24004.7 |
| mucoidy inhibitor muia family protein | F3W81_13400 | O44400 | Negative | 2840309 - 2841946 | 59062.4 |
| aspartate-semialdehyde dehydrogenase | F3W81_13405 | O67716 | Negative | 2842116 - 2843138 | 37318.6 |
| glucose 1-dehydrogenase | F3W81_13410 | P94681 | Negative | 2843296 - 2844036 | 26178.5 |
| aldehyde dehydrogenase family protein | F3W81_13415 | Q9SU63 | Negative | 2844064 - 2845515 | 50179.0 |
| dipeptide abc transporter atp-binding protein | F3W81_13420 | Q1RE96 | Negative | 2845582 - 2847168 | 57412.9 |
| abc transporter permease subunit | F3W81_13425 | P94312 | Negative | 2847180 - 2848052 | 31085.7 |
| abc transporter permease subunit | F3W81_13430 | Q8VQK4 | Negative | 2848049 - 2848996 | 34442.2 |
| abc transporter substrate-binding protein | F3W81_13435 | Q8X6V9 | Negative | 2849243 - 2850733 | 53492.0 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein | F3W81_13440 | Q2Y7X4 | Negative | 2850908 - 2852197 | 46946.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
