Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | F3W81_13345 | O31444 | Positive | 2831681 - 2832925 | 43660.5 |
| had-ia family hydrolase | F3W81_13350 | Q2UEL0 | Negative | 2832974 - 2833603 | 23077.3 |
| yaii/yqxd family protein | F3W81_13355 | Q16D98 | Negative | 2833637 - 2834101 | 16641.9 |
| tetr family transcriptional regulator | F3W81_13360 | O53165 | Positive | 2834382 - 2835008 | 23553.3 |
| hypothetical protein | F3W81_13365 | Not Available | Positive | 2835108 - 2835413 | 10710.8 |
| cytochrome c | F3W81_13370 | Q8UH04 | Negative | 2835482 - 2835919 | 15087.9 |
| duf2794 domain-containing protein | F3W81_13375 | Not Available | Positive | 2836266 - 2836643 | 14111.3 |
| nlp/p60 hydrolase | F3W81_13380 | P39043 | Negative | 2836612 - 2837451 | 29568.9 |
| leucyl aminopeptidase family protein | F3W81_13385 | Q3A831 | Negative | 2837454 - 2838869 | 49243.0 |
| hypothetical protein | F3W81_13390 | Not Available | Negative | 2838942 - 2839325 | 14031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
