Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | F3W81_13295 | P43011 | Negative | 2820970 - 2821875 | 32803.3 |
| hypothetical protein | F3W81_13300 | Not Available | Negative | 2822090 - 2822488 | 14233.3 |
| hypothetical protein | F3W81_13305 | Not Available | Negative | 2822519 - 2823292 | 29502.5 |
| hypothetical protein | F3W81_13310 | Not Available | Negative | 2823466 - 2824161 | 23708.6 |
| dihydroxy-acid dehydratase | F3W81_13315 | A8LKN5 | Negative | 2824148 - 2825905 | 62009.3 |
| cpbp family intramembrane metalloprotease | F3W81_13320 | P37513 | Positive | 2826009 - 2826878 | 30913.5 |
| cpbp family intramembrane metalloprotease | F3W81_13325 | P37513 | Positive | 2826875 - 2827789 | 32333.7 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | F3W81_13330 | Q28WD5 | Positive | 2827853 - 2828863 | 36921.8 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | F3W81_13335 | Q05865 | Positive | 2828860 - 2830134 | 45329.9 |
| cell division protein zape | F3W81_13340 | Q3V384 | Negative | 2830480 - 2831541 | 39239.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
