Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | F3W81_13145 | Q48IV1 | Positive | 2790178 - 2792061 | 68629.9 |
| response regulator | F3W81_13150 | Q9HUI2 | Positive | 2792058 - 2792765 | 26078.3 |
| hydantoinase/carbamoylase family amidase | F3W81_13155 | Q9F464 | Negative | 2792771 - 2793973 | 42549.4 |
| duf3775 domain-containing protein | F3W81_13160 | Not Available | Negative | 2794047 - 2794379 | 12336.5 |
| dna recombination protein rmuc | F3W81_13165 | Q9PG89 | Negative | 2794450 - 2795685 | 45474.6 |
| dna mismatch repair endonuclease mutl | F3W81_13170 | B4RA70 | Negative | 2795682 - 2797598 | 68915.9 |
| cysteine desulfurase | F3W81_13175 | Not Available | Negative | 2797722 - 2798942 | 45812.8 |
| ammonium transporter | F3W81_13180 | P54147 | Negative | 2799147 - 2800469 | 46342.5 |
| p-ii family nitrogen regulator | F3W81_13185 | O54053 | Negative | 2800501 - 2800839 | 12198.9 |
| pbp1a family penicillin-binding protein | F3W81_13190 | Q9KUC0 | Positive | 2801095 - 2803353 | 80192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
