Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2780618 - 2780692 | Not Available |
| 50s ribosomal protein l36 | F3W81_13100 | A8LMZ2 | Positive | 2780769 - 2780894 | 5023.3 |
| amp-binding protein | F3W81_13105 | Q72K16 | Negative | 2781039 - 2782259 | 43593.3 |
| atp-binding cassette domain-containing protein | F3W81_13110 | P21630 | Negative | 2782299 - 2783123 | 30509.8 |
| abc transporter substrate-binding protein | F3W81_13115 | Q8FWP6 | Negative | 2783187 - 2784467 | 46590.9 |
| branched-chain amino acid abc transporter permease | F3W81_13120 | P22729 | Negative | 2784544 - 2785620 | 38862.2 |
| hypothetical protein | F3W81_13125 | Not Available | Negative | 2785622 - 2785834 | 7578.4 |
| branched-chain amino acid abc transporter permease | F3W81_13130 | P0A2J2 | Negative | 2785963 - 2786949 | 35374.4 |
| atp-binding cassette domain-containing protein | F3W81_13135 | P21629 | Negative | 2787085 - 2787900 | 30561.0 |
| amp-binding protein | F3W81_13140 | Q7TYX8 | Negative | 2787933 - 2789876 | 71915.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
