Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | F3W81_13045 | A6WYN0 | Negative | 2768530 - 2769171 | 23856.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | F3W81_13050 | Q5LNE0 | Negative | 2769173 - 2770081 | 33793.9 |
| fmn-binding glutamate synthase family protein | F3W81_13055 | O34849 | Negative | 2770214 - 2771758 | 55899.1 |
| hypothetical protein | F3W81_13060 | P37740 | Positive | 2771993 - 2772748 | 28077.3 |
| atp-dependent chaperone clpb | F3W81_13065 | Q98G96 | Negative | 2773039 - 2775657 | 95677.7 |
| hypothetical protein | F3W81_13070 | Not Available | Positive | 2775877 - 2776185 | 11684.9 |
| orotidine-5'-phosphate decarboxylase | F3W81_13075 | Q5LND3 | Positive | 2777087 - 2777803 | 25088.2 |
| nudix domain-containing protein | F3W81_13080 | Not Available | Negative | 2777832 - 2778278 | 16931.1 |
| dna polymerase iv | F3W81_13085 | Q92QM8 | Positive | 2778341 - 2779606 | 46476.1 |
| n-formylglutamate amidohydrolase | F3W81_13090 | Q9HU92 | Negative | 2779611 - 2780471 | 31437.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
