Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease | F3W81_12945 | Q02886 | Positive | 2748505 - 2749032 | 19230.7 |
| hypothetical protein | F3W81_12950 | P39832 | Negative | 2749033 - 2749842 | 27653.8 |
| atp-binding cassette domain-containing protein | F3W81_12955 | Q1GL85 | Negative | 2749839 - 2750603 | 27354.8 |
| transcriptional repressor | F3W81_12960 | P0AC51 | Negative | 2750600 - 2751082 | 17351.6 |
| zinc transporter | F3W81_12965 | Q2YJH5 | Positive | 2751181 - 2752131 | 33688.7 |
| hypothetical protein | F3W81_12970 | Not Available | Negative | 2752128 - 2752796 | 24398.0 |
| hypothetical protein | F3W81_12975 | Q02998 | Positive | 2753087 - 2755540 | 90669.6 |
| aspartate kinase | F3W81_12980 | A4VFY3 | Negative | 2756049 - 2757479 | 52172.2 |
| l-ectoine synthase | F3W81_12985 | Q0C1P4 | Negative | 2757568 - 2757966 | 14898.5 |
| diaminobutyrate--2-oxoglutarate transaminase | F3W81_12990 | Q9KED4 | Negative | 2757971 - 2759257 | 45498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
