Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family dna-binding protein | F3W81_00820 | Q9X5V4 | Negative | 182258 - 182632 | 14977.9 |
| hotdog fold thioesterase | F3W81_00825 | P0ADP3 | Positive | 182775 - 183212 | 15341.3 |
| paai family thioesterase | F3W81_00830 | P0ADP3 | Positive | 183212 - 183730 | 19020.9 |
| mate family efflux transporter | F3W81_00835 | P28303 | Positive | 183727 - 185061 | 47428.2 |
| arsenate reductase (glutaredoxin) | F3W81_00840 | P63621 | Negative | 185062 - 185403 | 12457.2 |
| quinone-dependent dihydroorotate dehydrogenase | F3W81_00845 | A3PN03 | Negative | 185400 - 186458 | 37668.4 |
| duf952 domain-containing protein | F3W81_00850 | Not Available | Negative | 186494 - 186829 | 12123.4 |
| multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase | F3W81_00855 | P29240 | Positive | 187069 - 188637 | 54940.5 |
| duf4405 domain-containing protein | F3W81_00860 | Not Available | Negative | 188703 - 189362 | 23125.4 |
| duf1992 domain-containing protein | F3W81_00865 | P36677 | Positive | 189361 - 189669 | 11491.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
