Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | F3W81_12895 | Q9HX72 | Positive | 2740932 - 2741537 | 22775.9 |
| chorismate mutase | F3W81_12900 | Q9ZHY3 | Positive | 2741524 - 2741856 | 12421.9 |
| 30s ribosomal protein s16 | F3W81_12905 | Q16AN8 | Positive | 2741938 - 2742321 | 13836.6 |
| 16s rrna processing protein rimm | F3W81_12910 | Q1GDC5 | Positive | 2742630 - 2743148 | 18308.8 |
| hypothetical protein | F3W81_12915 | Not Available | Positive | 2743150 - 2743974 | 30144.5 |
| trna (guanosine(37)-n1)-methyltransferase trmd | F3W81_12920 | Q1GDC3 | Positive | 2744018 - 2744989 | 35419.3 |
| 50s ribosomal protein l19 | F3W81_12925 | Q5LNE8 | Positive | 2745399 - 2745776 | 13914.9 |
| 50s ribosomal protein l31 | F3W81_12930 | Q16AP4 | Positive | 2745788 - 2746009 | 8114.79 |
| hypothetical protein | F3W81_12935 | O66504 | Positive | 2746279 - 2747451 | 41663.5 |
| aaa family atpase | F3W81_12940 | Q72H90 | Positive | 2747681 - 2748490 | 29882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
