Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-8x methylmutase | F3W81_12745 | Q9HZU2 | Negative | 2711895 - 2712533 | 22078.7 |
| sirohydrochlorin chelatase | F3W81_12750 | O87690 | Negative | 2712610 - 2713761 | 41812.3 |
| hypothetical protein | F3W81_12755 | Not Available | Negative | 2713767 - 2713967 | 6762.79 |
| glutathione s-transferase family protein | F3W81_12760 | P42620 | Positive | 2714359 - 2715363 | 38382.8 |
| response regulator | F3W81_12765 | Not Available | Negative | 2715433 - 2715807 | 13660.2 |
| duf1636 domain-containing protein | F3W81_12770 | Not Available | Positive | 2716114 - 2716488 | 13212.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | F3W81_12775 | P21633 | Positive | 2716485 - 2717426 | 33139.5 |
| cobalamin biosynthesis protein | F3W81_12780 | Q5LNI0 | Positive | 2717423 - 2718331 | 32814.2 |
| lytic murein transglycosylase | F3W81_12785 | P41052 | Positive | 2718402 - 2719577 | 42422.4 |
| chromosome segregation protein smc | F3W81_12790 | A3PMS2 | Negative | 2719825 - 2723280 | 126926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
