Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | F3W81_12695 | Q5LLW6 | Negative | 2701670 - 2702434 | 26968.5 |
| sdr family nad(p)-dependent oxidoreductase | F3W81_12700 | P9WGQ6 | Negative | 2702447 - 2703214 | 26242.6 |
| trap transporter large permease subunit | F3W81_12705 | Q9HU16 | Negative | 2703320 - 2704642 | 47154.4 |
| trap transporter small permease subunit | F3W81_12710 | Not Available | Negative | 2704639 - 2705208 | 20270.2 |
| c4-dicarboxylate abc transporter | F3W81_12715 | Q315G1 | Negative | 2705354 - 2706388 | 37240.6 |
| hypothetical protein | F3W81_12720 | Not Available | Negative | 2706700 - 2707071 | 13553.1 |
| precorrin-4 c(11)-methyltransferase | F3W81_12725 | P21922 | Negative | 2707246 - 2708022 | 27850.8 |
| precorrin-3b c(17)-methyltransferase | F3W81_12730 | P21640 | Negative | 2708134 - 2709933 | 62229.2 |
| precorrin-2 c(20)-methyltransferase | F3W81_12735 | Q9HZU3 | Negative | 2709924 - 2710622 | 23999.4 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | F3W81_12740 | Q9HZU0 | Negative | 2710696 - 2711898 | 42800.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
