Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3859 domain-containing protein | F3W81_12645 | Not Available | Positive | 2690900 - 2691742 | 30035.7 |
| tsup family transporter | F3W81_12650 | Not Available | Negative | 2691743 - 2692516 | 26840.2 |
| acyl-coa dehydrogenase | F3W81_12655 | D3JV03 | Positive | 2692663 - 2694348 | 61243.2 |
| hypothetical protein | F3W81_12660 | Not Available | Positive | 2694819 - 2695904 | 38170.8 |
| fasciclin domain-containing protein | F3W81_12665 | P74615 | Negative | 2695989 - 2696564 | 19449.5 |
| trimeric intracellular cation channel family protein | F3W81_12670 | O86576 | Negative | 2696750 - 2697340 | 20318.5 |
| 3-keto-5-aminohexanoate cleavage protein | F3W81_12675 | B0VHH0 | Positive | 2697503 - 2698336 | 30260.1 |
| amidohydrolase family protein | F3W81_12680 | P38094 | Negative | 2698482 - 2699354 | 32788.2 |
| amp-binding protein | F3W81_12685 | P63522 | Negative | 2699366 - 2701156 | 64286.7 |
| marr family transcriptional regulator | F3W81_12690 | O33817 | Negative | 2701140 - 2701670 | 19811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
