Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2672815 - 2673241 | Not Available |
| universal stress protein | F3W81_12550 | Not Available | Positive | 2673386 - 2673841 | 16641.1 |
| hypothetical protein | F3W81_12555 | Not Available | Positive | 2674138 - 2674704 | 20665.1 |
| nifu family protein | F3W81_12560 | Q9C8J2 | Positive | 2674890 - 2675456 | 19885.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | F3W81_12565 | Q87RD1 | Positive | 2675446 - 2676081 | 21458.7 |
| ribosomal-protein-alanine n-acetyltransferase | F3W81_12570 | P0A946 | Positive | 2676078 - 2676506 | 15528.7 |
| bmp family abc transporter substrate-binding protein | F3W81_12575 | O05252 | Positive | 2676663 - 2677670 | 34985.2 |
| atp-binding cassette domain-containing protein | F3W81_12580 | A2RKA7 | Positive | 2677765 - 2679369 | 58099.3 |
| abc transporter permease | F3W81_12585 | O05254 | Positive | 2679362 - 2680456 | 38699.1 |
| abc transporter permease | F3W81_12590 | O05255 | Positive | 2680460 - 2681422 | 34077.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
