Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxoguanine deaminase | F3W81_12495 | Q9I6Z0 | Negative | 2664542 - 2665882 | 47629.2 |
| histidinol-phosphatase | F3W81_12500 | Q6NPM8 | Negative | 2665886 - 2666689 | 28098.5 |
| helix-turn-helix domain-containing protein | F3W81_12505 | A6U5H5 | Negative | 2666746 - 2667114 | 13964.6 |
| zinc-binding dehydrogenase | F3W81_12510 | Q3UNZ8 | Positive | 2667447 - 2668418 | 34131.7 |
| lysr family transcriptional regulator | F3W81_12515 | P16931 | Negative | 2668434 - 2669330 | 32962.8 |
| duf1127 domain-containing protein | F3W81_12520 | Not Available | Positive | 2669457 - 2669675 | 8254.07 |
| bax inhibitor (bi)-1/ycca family protein | F3W81_12525 | P0AAC5 | Positive | 2669989 - 2670726 | 26509.0 |
| gnat family n-acetyltransferase | F3W81_12530 | Not Available | Negative | 2670808 - 2671434 | 22610.3 |
| 50s ribosomal protein l33 | F3W81_12535 | Q5LP83 | Negative | 2671571 - 2671738 | 6366.93 |
| prc-barrel domain containing protein | F3W81_12540 | Not Available | Negative | 2671924 - 2672541 | 20977.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
